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A report to the Director-General of WHO
The Independent Advisory Group on
Public Health Implications of Synthetic
Biology Technology Related to Smallpox
Geneva, Switzerland
29-30 June 2015
WHO/HSE/PED/2015.1
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© World Health Organization 2015. All rights reserved.
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Contents
Executive summary ....................................................................................................... 5
Purpose .........................................................................................................................................................5
Background ...................................................................................................................................................5
Methodology ..................................................................................................................................................5
Implications ....................................................................................................................................................5
1. Background ............................................................................................................. 7
1.1 Objectives and process of the consultation ...........................................................................................7
1.2 Overview of smallpox .............................................................................................................................7
1.3 Report of the Scientific Working Group .................................................................................................8
2. Independent Advisory Group discussions ........................................................... 9
2.1 Methodology of scenario-based discussions .........................................................................................9
2.2 Discussion of the scenarios ...................................................................................................................9
2.2.1 Scenario 1: A remote area in a developing country ........................................................................... 9
2.2.2 Scenario 2: A densely populated city............................................................................................... 10
2.2.3 Scenario 3: A laboratory accident .................................................................................................... 10
2.2.4 Scenario 4: Individuals inject themselves with synthesized variola virus ........................................ 11
3. Implications ........................................................................................................... 12
3.1 Risk of smallpox .................................................................................................................................. 12
3.2 Implications for preparedness............................................................................................................. 12
3.3 Implications for research ..................................................................................................................... 13
4. Way forward........................................................................................................... 14
Annexes........................................................................................................................ 15
Annex 1. List of participants ....................................................................................................................... 15
Annex 2. Agenda ........................................................................................................................................ 16
Annex 3. Report of the Scientific Working Group Meeting on Synthetic Biology and Variola Virus
and Smallpox .............................................................................................................................. 17
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Executive summary
Purpose
The purpose of the meeting was to provide guidance to the WHO Director-General on the public health
implications of synthetic biology technology as it relates to public health measures for smallpox preparedness
and control. The public health implications are for countries and for WHO, and include diagnostics, vaccines
and medicines and research related to the variola virus.
Background
At the Sixty-seventh World Health Assembly in May 2014, WHO was requested to undertake a consultation on
the use and potential impact of technologies for synthetic biology on smallpox preparedness and control, in
order to further inform the World Health Assembly in its discussions on the timing of the destruction of existing
variola virus stocks. As part of this consultative process a group of experts, the Independent Advisory Group
(IAG) on Public Health Implications of Synthetic Biology Technology Related to Smallpox, was convened at the
end of June 2015 in order to provide an assessment to the Director-General.
Prior to the meeting of the IAG, a Scientific Working Group (SWG) on Synthetic Biology and Variola Virus and
Smallpox was convened on 1617 April 2015 to review the evidence and inform the deliberations of the IAG.
The SWG addressed relevant scientific and technical questions around the re-creation of variola virus; the risks
and benefits of synthetic biology for variola virus research; and the guidance required from WHO regarding
distribution and handling of live variola virus maintained at the two designated WHO collaborating centres that
are authorized repositories of variola virus. The conclusions of the SWG were as follows:
“With the rapid advances in synthetic biology, there is now the
capability to recreate the variola virus, the
causative agent of smallpox. While recreating variola is quite complex, it is increasingly possible due to the
availability of genetic material and of machines for complex assembly, as well as increasing know-how
among a broad array of persons. Furthermore, the rapid rise in availability of genetic material from
commercial sources and the so-called
“grey market” is driving the cost of this material down, making
recreation
possible by multiple institutions and persons, including those with malicious intent. The “WHO
Recommendations concerning the distribution, handling and synthesis of variola virus DNA” should be
revised. Consideration should be given to adding a component or separate document on guidance to
commercial DNA providers for screening requests for DNA fragments.
With the development of these technologies, public health agencies have to be aware that henceforth there
will always be the potential to recreate variola virus, and therefore the risk of smallpox re-emerging can
never be fully eradicated.”
Methodology
A scenario approach was chosen to foster discussion and debate on the implications of synthetic biology
among the members of the IAG. They were expected neither to comment on the likelihood of occurrence of the
scenarios nor to provide solutions or recommendations for them; rather the aim was to have illustrative events
to frame and guide the discussions.
The four scenarios described the following situations and were followed by discussions on the question of the
impact of synthetic biology on controlling the emergence of smallpox disease.
Scenario 1: the emergence of smallpox-like disease in a remote area in a developing country.
Scenario 2: the emergence of smallpox-like disease in a densely populated city.
Scenario 3: the emergence of smallpox-like disease following a laboratory accident.
Scenario 4: a situation in which a group of individuals inject themselves with synthesized variola virus.
Implications
Before synthetic biology was possible, two potential situations for re-emergence existed: (1) natural re-
emergence (e.g. by mutation of another poxvirus), and/or (2) a laboratory release (deliberate or accidental)
from one of the two WHO variola virus repositories or from unknown locations.
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Therefore, the risk of re-emergence is not new. However, it has increased as synthetic biology technologies to
recreate, and even modify, the virus continue to become cheaper and more easily accessible. Even if the live
virus stocks are destroyed, the act of destruction is not irrevocable.
Given that the risk has changed, the key questions facing the world now are:
Is the world prepared for this additional risk? If not, what should be done to become sufficiently
prepared?
What are the implications for (1) public health preparedness for re-emergence and (2) research around
this new risk?
Does the new, additional risk change the parameters of the discussion for the destruction of the variola
virus in the two repositories?
Based on recent reviews of the public health responses to the H1N1 pandemic and to the Ebola outbreak,
there is recognition of fundamental gaps in several areas of preparedness for any emerging disease outbreak,
including smallpox. Risk reduction strategies and preparedness need to be adapted to take into account this
new risk from synthetic biology in addition to the core capacities already required under the International Health
Regulations 2005 (IHR 2005), including:
Increased capacity for early detection and diagnostics:
clinical capacity to recognize and treat
smallpox; laboratory capacity, particularly at local level; development of simple diagnostic tests.
Increased capacity for disease control:
anticipation and preparedness of requirements for public
health countermeasures such as vaccines and antivirals; supplies and quantities of vaccines and
drugs needed for different scenarios; global expertise in specific epidemic diseases such as smallpox.
Increased biosecurity:
revised regulations for research on DNA fragments of variola virus and
synthesis of variola virus DNA by new technologic approaches;; increased biosafety and biosecurity in
laboratories, including stock inventories; strengthened regulatory frameworks and their
implementation; coordination between sectors including health, judiciary, law enforcement and
customs.
More effective risk communication:
acknowledgement of risk in the context of other infectious risks;
transparency regarding dangers and measures to prevent and avoid them; avoidance of attempts to
mislead the public; tracking of and responding to rumours; community engagement to detect and
manage disease and to assist in information sharing.
Synthetic biology goes beyond smallpox and should be considered in relation to the elimination and eradication
of other infectious diseases as well.
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1. Background
1.1 Objectives and process of the consultation
The Independent Advisory Group (IAG) on Public Health Implications of Synthetic Biology Technology Related
to Smallpox met at WHO headquarters on 2930 June 2015. The purpose of the meeting was to provide
guidance to WHO’s Director-General
on the public health implications of synthetic biology technology, as
related to public health smallpox preparedness and control. The implications reviewed were for countries and
for WHO, including diagnostics, vaccines and medicines and research related to the variola virus. The agenda
of the meeting is contained in Annex 1. A list of the members of the Independent Advisory Group and of the
resource persons who attended the meeting is contained in Annex 2.
The meeting was opened by Dr Keiji Fukuda who welcomed the participants. Dr Fukuda stressed the
importance of the meeting, noting that the matters to be discussed would be significant not only for smallpox
but also for other issues. Although the disease smallpox had been eradicated, Dr Fukuda noted that the virus
still exists in research laboratories. In addition, with the development of synthetic biology the recreation of
variola virus has become a possibility. He pointed out that the issue of the timing of the destruction of the
variola virus is a matter for discussion by WHO Member States.
The topic was being addressed because the World Health Assembly in 2014 had asked about the significance
of synthetic virology in relation to smallpox. The Director-General
would respond to the Health Assembly’s
question and the meeting of the Independent Advisory Group would be a major part of preparing that response.
The Director-General would consider the advice given by the IAG and would decide how to disseminate the
report.
The meeting was attended by members of the IAG as well as four internationally renowned experts on variola
virus and smallpox. All participants were asked to treat the discussions as confidential.
1.2 Overview of smallpox
Dr Sylvie Briand gave an introduction to smallpox disease which has been a cause of fear for centuries and for
which the first ever
vaccine was developed in 1796. WHO’s smallpox eradication
programme was started in
1966, and the last natural case of the disease was reported in 1977 in Somalia. The World Health Assembly
declared smallpox eradicated in 1980. However, the variola virus has not been eradicated, as it was decided at
that time to maintain stocks in the Soviet Union and the United States. The live virus is today maintained at two
WHO Collaborating Centres: the Centres for Disease Control and Prevention, Atlanta, USA (CDC), and the
State Research Centre of Virology and Biotechnology, Novosibirsk, Russian Federation (VECTOR).
Humans were the only reservoir for the disease. The disease course has a long incubation period of 717
days. People are infectious only from the onset of rash and remain infectious until disappearance of the last
scab. Transmission is through large and small particle aerosols, and direct contact with body fluids. The
disease is also spread by fomites. In its last decades the disease was chiefly spread in households and health-
care settings. In a susceptible population the average number of cases of smallpox generated by an infected
person is 36 (while for measles it is 1218).
The symptoms of the disease can be confused with other diseases such as monkeypox and even chickenpox.
Various vaccines and diagnostics are available, and antivirals are being developed. In addition there is VIG
(Vaccinia Immune Globulin) which is made from the blood of individuals who have been vaccinated with the
smallpox vaccine. Given the research of recent decades there are more interventions available now than there
were in the pre-eradication period.
During the Smallpox Eradication Programme, the vaccine used had serious adverse reactions (5-10 in one
million vaccinees), and 1-2 in one million died. However, vaccination was carried out because the risk from the
vaccine was less than the risk from the disease. Today the vaccine could not be used in certain populations,
such as persons with HIV. Although attenuated, safer vaccines are available, there is uncertainty about their
effectiveness and safety in mass campaigns.
It is highly likely that an outbreak of smallpox will lead to similar challenges to those posed by the recent Ebola
outbreak in West Africa or MERS-CoV outbreak in the Republic of Korea. Major priorities in such an outbreak
would be fear management, risk communication and community engagement to promote compliance with
control measures and reduction of stigma. If several countries are infected there will need to be rapid delivery
of vaccines, and countries would be expected to want more than they need. The global emergency stockpile of
smallpox vaccine is 2.4 million doses in Switzerland, plus 32 million doses donated and available in other
countries. The overall quantity of vaccine available is estimated to be around 700 million doses. There is a lack
of clarity about the length of immunity after vaccination, and the only certain lifetime protection comes from
having already had smallpox once.
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The main concern in an outbreak of smallpox would be that no one under 40 years of age (around 3.6 billion
people) has been vaccinated, thus leading to an increasingly susceptible population. There would be delays in
diagnosis since the disease is unknown by many health workers, and a global panic can be anticipated even
with only a small number of cases.
There would be a major economic impact
the 2015 outbreak of Middle East Respiratory Syndrome
Coronavirus (MERS-CoV) in the Republic of Korea is estimated to have cost the Korean economy many
billions of dollars. .
Meeting participants noted that little is known about potential hidden stocks of variola viruses. At the same
time, the development of synthetic biology reduces our confidence in eradication. If the disease were to
reappear, whether naturally or due to a synthetic virus, we would have 14 days (maximum incubation period) to
vaccinate contacts. However, given the intensity of international travel, the disease would potentially spread
rapidly and, since health systems in developing countries are often under-resourced, delays in diagnostics can
be anticipated.
1.3 Report of the Scientific Working Group
In April 2015 WHO convened a meeting of a Scientific Working Group (SWG) on Synthetic Biology and Variola
Virus and Smallpox. The report of the SWG, which was presented to the Independent Advisory Group by
Professor Geoffrey Smith, is attached as Annex 3. The aim of the SWG was to provide scientific background
information on synthetic biology technology with regard to the variola virus.
The SWG concluded that, with the increasing availability of DNA fragments that can be synthesized from
simple chemicals, it would be possible to recreate variola virus, and that this could be done by a skilled
laboratory technician or by undergraduate students working with viruses in a relatively simple laboratory. To
recreate the variola virus by synthesizing the DNA and then relinking the parts is theoretically possible but is
considered to be highly unlikely to happen accidentally since the variola genome is large and complex. It was
therefore felt that synthesis would require a deliberate and sustained effort.
Over 45 genomes of the variola virus have been sequenced and the sequence is in the public domain, and
other orthopox viruses (which have similar DNA) have been recreated. Recreating variola virus is prohibited by
under the World Health Assembly (WHA) resolutions, though anyone trying to do this may not know or care
about WHO’s rules.
Someone recreating the virus could, either by accident or deliberately, introduce elements
to enhance its virulence or make it resistant to existing medicines and vaccines.
The SWG noted that, although a recreated variola virus could be useful for research on vaccines and
diagnostic tests, there are serious concerns regarding modifications of the virus by institutions or individuals
with malicious intent. Members of the SWG concluded that the WHO recommendations concerning the
distribution, handling and synthesis of variola virus DNA should be revised. Additionally, consideration should
be given to the addition of a component or separate document on guidance to commercial DNA providers
regarding screening of requests for DNA fragments. The SWG further concluded that, given the ability to
recreate the variola virus using synthetic biology techniques, the destruction of the remaining stocks of variola
virus at the two WHO Collaborating Centres would not irrevocably destroy the virus. After destruction of the
stocks, the variola virus could still be recreated.
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2. Independent Advisory Group discussions
2.1 Methodology of scenario-based discussions
A scenario approach was used to foster discussion among the members of the IAG on the impact of synthetic
biology on smallpox preparedness and control. Participants were asked to discuss what would be the
implications of synthetic biology in the following fictional scenarios, where the re-emergence of smallpox would
be suspected.
Scenario 1 described the emergence of smallpox-like disease in a remote area in a developing
country.
Scenario 2 described the emergence of smallpox-like disease in a densely populated city.
Scenario 3 described the emergence of smallpox-like disease following a laboratory accident.
Scenario 4 described a situation in which a group of individuals inject themselves with synthesized
variola virus.
The purpose of discussions was not to comment on the likelihood of each scenario happening, but rather to
focus on what would be likely to happen if such a situation occurred and the role of synthetic biology. The
ensuing discussion for each scenario is summarized in the next section.
2.2 Discussion of the scenarios
2.2.1 Scenario 1: A remote area in a developing country
Summary
Challenges in recognizing the clinical symptoms of the disease.
Challenges in laboratory diagnosis and confirmation (at least 8 weeks) requiring a reference
laboratory.
Limited use of synthetic biology for the rapid development of control measures.
Members of the IAG agreed that the emergence of smallpox in a remote area in a developing country raised a
number of specific issues related to the poor state of the health system and the remoteness of the event.
Remoteness meant that the virus was unlikely to spread as rapidly as in an urban environment, and could
probably be contained in the area without international spread. However, it would also delay the arrival of
outbreak investigators to the area and, once there, they may not suspect smallpox. Local laboratories would
have no possibility to diagnose the disease. A national reference laboratory would find it was a poxvirus but this
was likely to mislead the authorities into thinking it was monkeypox or another poxvirus. Monkeypox is endemic
in the Democratic Republic of the Congo and appears to be increasing; it probably also exists in other tropical
countries. Only after a WHO collaborating centre examined samples would it be possible to identify smallpox,
by which time almost eight weeks would have passed.
Possible solutions in this scenario could include mobile telephone apps that recognize the nature of disease
from a photograph, or dipstick-like diagnostics. The latter are already being developed by CDC to be orthopox-
sensitive and variola-specific.
It was felt that most public health laboratories in Africa would be able to identify a virus as an orthopox, but a
reference laboratory would be required to identify variola.
It would be beneficial to have a reference standard against which to measure a circulating virus; thus, if there
was no live variola virus in the repositories, a new one could be created as a reference using synthetic biology.
However, this would take months or years with the current technologies. One could use only the new isolate,
which would be quicker, but this would not provide the same level of certainty.
A possible solution discussed by the IAG would be to supply the live variola virus to local or regional reference
laboratories to help in diagnosis. However, it was acknowledged that this requires consideration of the risk of
unintentional or intentional release of the virus relative to required biosafety and biosecurity measures for a
virus which has been kept under tight security since 1980.
The general opinion was that synthetic biology has had little impact on the work of the collaborating centres on
variola virus. Synthetic biology has been used partly to develop some of the proteins on the surface of the
virus. If a new strain of variola virus with different characteristic than the current live variola virus were
developed and released, it is highly unlikely that synthetic biology could be used to develop an effective
vaccine quickly.
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2.2.2 Scenario 2: A densely populated city
Summary
Transmission will be faster in densely populated areas and contact tracing will be extremely
difficult.
Rapid scale-up of laboratory diagnostic capacity will be required in many places in the case
of re-emergence.
The IAG again raised the issue of the capability of the health system to detect the virus, coupled again with
delays in identification due to a complete lack of familiarity with it. After all, no one looks for an illness that has
been eradicated. The crowded environment in a city increases the chance of spread, and the fact that patients
can easily visit several doctors and hospitals also increases the risk of further infections. Contract tracing would
be a major undertaking. While persons with infectious smallpox are usually so sick that they will not travel, the
fact that the cities are usually close to ports and/or airports, means that the chance of spread to other areas
and countries is enhanced.
While this scenario had a shorter timeline from detection to diagnosis than the first one, the scale of potential
infection is also much greater. Some members felt, however, that making the diagnosis of smallpox within 20
days would be very optimistic, as the likelihood would be that a zoonotic illness would be suspected and
searching for this would take time. On the issue of diagnosis, the view was expressed that, if we know we are
not able to eliminate the risk of smallpox definitely, we should not destroy the tools and experience we have,
and hands-on experience will be very important, at least for the next 30 years. However, a contrary view was
that there will continue to be a great deal of genetic research in the coming years and much of this will apply to
variola virus, so expertise in this area is likely to increase rather than diminish.
Asked how viable it would be for the collaborating centres to supply primers to laboratories elsewhere at the
request of WHO, VECTOR said it would send the primers and assay kits within a week. CDC noted it would
take longer due to approvals but they would do it, and they would want to do proficiency testing to ensure that
the primers work in a different environment.
2.2.3 Scenario 3: A laboratory accident
Summary
A laboratory accident is always possible but the risk can be minimized by training of
laboratory staff and strict application of biosecurity norms.
The risk of accident is higher in illicit and unregulated laboratories.
In this scenario of a laboratory accident, it was noted that a national microbiological institute should not
possess variola virus. In a recent case (US National Institutes of Health (NIH), USA 2014), where unlabelled
vials of variola virus were discovered, the contents were presumably thought to be old, but safe, material. In
that situation it was fortunate that the person who handled the vials did so carefully and according to training,
and appropriate biosafety procedures were followed upon discovery. In the USA the discovery of these old
variola vials led to NIH, CDC and others carrying out a full stocktake and catalogue of all stored materials.
Members of the IAG said the scenario showed the need for training and strict compliance with procedures to
avoid such an accident. However, it was felt that this kind of accident is always possible
not only in amateur
laboratories but even in high-level ones. Procedures would probably be much less strict in a laboratory doing
illicit research with variola virus
Some members felt that in the first three scenarios it was astonishing that someone would ever consider that
the cause might be a poxvirus. In reality, it would generally take a very long time to come to that conclusion. It
was also noted that to distinguish a natural virus from a newly recreated one would require genome sequence
determination and comparison, and if these were identical, the viruses could not be distinguished.
Asked the question whether, if all the current samples were destroyed, they could be recreated after
destruction of the originals, both CDC and VECTOR replied that WHO recommendations prohibit them from
doing so. Not all samples have been sequenced so a number of them could not be recreated anyway, though
CDC reported it had been asked to sequence all samples and had partly done so. Professor Smith said there
was no need to work with the live variola virus in order to be able to respond to a future possible smallpox
outbreak. One could use other orthopox viruses to maintain this skill set in a trained staff under containment
conditions.
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2.2.4 Scenario 4: Individuals inject themselves with synthesized variola virus
Summary
Re-emergence of smallpox will create fear and panic which can have an impact far worse
than that of the disease itself.
Rapid confirmation of suspected cases will be essential; thus the rapid increase of
diagnostic capacity will be critical.
In this scenario, the IAG felt that the major issue to be faced was widespread fear and panic. Services would
soon be overwhelmed and emergency stocks of vaccines would be insufficient.
Advisory Group members were agreed that this was a nightmare scenario that would go beyond the health
sector and would be an issue of the highest order in every country. There would be insufficient vaccines, test
kits, capacity and everything else, and the widespread public panic would be complicated by politics.
Communication is important, but the entire system of communication would likely be disrupted. Rumours would
spread on social media and the authorities would spend their time responding to problems rather than
anticipating and preparing for them.
As for research and diagnostic capacity, CDC has five persons working on live variola virus and some others
who are trained to do so; through the various US services, diagnostic capacity could be scaled up fairly quickly.
However, in this scenario, it could be possible, if WHO so decided and Member States were in agreement, to
downgrade the pathogen to Biosecurity Level 3 so that many more laboratories could be allowed to work on
diagnosis. VECTOR reported having only a few persons trained to work on the live virus. In general there is a
need for laboratory surge capacity that would need to be addressed.
The WHO stockpile of smallpox vaccine would, as in the case of other vaccines, be available within a week. It
was noted that SAGE (Strategic Advisory Group of Experts on Immunization) judged that vaccination would be
targeted to specific groups and not the entire population. Ensuring equitable and timely access to suitable
medical interventions would be challenging in the case of very high demand. One expert mentioned that
sanctions in Iran prevented the country from purchasing reference kits or other equipment for diagnostics, thus
reducing preparedness capacity.
In a more general discussion, members of the IAG commented that the maintenance of the virus stocks after
1980 had led to today’s
situation in which the virus DNA has been sequenced and the sequence has been
published. Consequently, as the SWG concluded, even if the virus stocks are destroyed today, the virus could
potentially be recreated.
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3. Implications
3.1 Risk of smallpox
Much of the discussion focused on the issue of risk. The nature of the risk of smallpox re-emergence has
changed significantly over the past several decades. The IAG concluded that:
The risk of variola virus re-emerging from natural sources is not likely to be greater today than in 1980,
though it cannot be excluded.
Following the eradication of smallpox in 1980, the risk of the disease re-emerging is likely to be from
accidental or deliberate release of the virus from one or both of the two repositories or from other
unknown locations.
Additionally, the variola virus can now be recreated with synthetic biology and even modified. Many
facilities worldwide
including some poorly regulated or unregulated laboratories
are thought to have
the knowledge and expertise to do this. The nature of risk is evolving and is linked to the reduced cost
of technology and ease of access to use it.
3.2 Implications for preparedness
Given the evolution in the risk from variola virus, the IAG concluded that preparedness and response must also
change and that strategies are needed for risk reduction.
In theory smallpox is easy to control. However, experience has taught us that the control of epidemic diseases
and the implementation of simple measures such as infection prevention and control can be challenging. In
addition, the element of fear leads people to behave in irrational ways.
Emphasizing the importance of the core capacities required by the International Health Regulations (2005), the
IAG agreed that smallpox risk reduction strategies should include:
Increased capacity for early detection
increased clinical capacity to recognize and treat smallpox (e.g. develop and disseminate mobile
telephone applications for photo recognition of skin diseases);
increased laboratory capacity, particularly at local level;
simple rapid diagnostic tests (such as dipstick diagnostics) for countries with low diagnostic
capacity.
Increased capacity for disease control
more public health countermeasures such as vaccines and antivirals;
reconsideration of the quantity of vaccines, diagnostics and antivirals likely to be needed in
different scenarios; and
increased global preparedness against specific epidemic diseases such as smallpox.
Increased biosecurity
revised regulations for research on DNA fragments of variola virus;
increased biosafety and biosecurity in all laboratories, including regular inventories of stocks;
strengthening of existing regulatory frameworks to ensure that they are applied correctly; and
coordination between sectors such as health, judiciary, law enforcement and the customs service.
More effective risk communication
risk communication that acknowledges risk honestly, but puts it into perspective in comparison
with other infectious risks;
transparency regarding dangers and what is being done to avoid or protect against them;
avoidance of attempts to mislead the public;
tracking of rumours (especially on social media) and responding to them quickly with factual
information; and
community engagement in support of activities to detect and manage disease and to assist in
sharing information.
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3.3 Implications for research
A summary of the work of the WHO Advisory Committee on Variola Virus Research (ACVVR) was presented
by its chair, Professor Geoffrey Smith of the University of Cambridge. After the declaration of smallpox
eradication in 1980, the WHO Ad Hoc Committee on Orthopox Virus Infections recommended that live variola
virus stocks should be destroyed. This resolution was passed by the World Health Assembly in 1996 and
destruction was set for 1999. However, destruction was postponed so that essential research for public health
benefit could be undertaken, under the oversight of the WHO ACVVR. There are only two WHO‐sanctioned
repositories of live variola virus in the world, CDC and VECTOR. Besides undertaking research with live variola
virus, these institutions provide fragments of the virus to other laboratories that are governed by WHA
resolutions. Reports of the ACVVR are provided regularly
to WHO’s governing bodies.
The research conducted under the auspices of the ACVVR has special importance. A number of IAG members
urged that the research scope and terms of reference of the ACVVR should be reviewed to ensure that they
take account of the new situation. They should also potentially be enlarged to include research on the efficacy
of current vaccines and resistance to antivirals, biosafety and biosecurity, forensics in case of an outbreak, and
scientific survey/monitoring. Professor Smith responded that any proposals for further research should be
specific rather than general, and that the ACVVR scope is already sufficiently broad to take account of these
issues.
WHO’s recommendations on research with the live variola virus should be strengthened
and given more
emphasis. Some members even suggested that the recommendations against unauthorized use should be
backed by sanctions. The IAG felt it was unlikely that any WHO Member State has adopted laws on the basis
of the WHO recommendations so there is no effective sanction if they are contravened. Many persons in
laboratories around the world may not even know of these recommendations.
There should be consideration of whether the risk of a smallpox outbreak is reduced by limiting variola
research to only the two specialized WHO collaborating centre laboratories or whether risk would be further
reduced by permitting live variola virus research in more laboratories. This would require increasing expertise
and capacities, in addition to instituting appropriate regulations and regulatory mechanisms, especially by
national authorities.
Some members felt that, despite the presence of resource persons, there was a lack of clarity regarding the
types of research activities that require the live virus (i.e. in the WHO collaborating centres) and what activities
can be done elsewhere or with non-live virus or DNA fragments. All variola research so far has been on the live
virus or DNA fragments, so if we are to move to recommending research without the live virus we need to
understand what this would involve and what the risks are.
Key points
Adapted rules and regulations for manipulating and synthesizing variola virus genomes are
necessary.
There should be consideration of future research models, including the number of research sites
and expertise development at global level.
National public health laws should back WHO’s
recommendations concerning the distribution,
handling and synthesis of variola virus DNA.
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4. Way forward
Recognizing that the risk of smallpox re-emergence has increased with the low cost and widespread availability
of technology to synthesize genomes, the IAG concluded that the WHO recommendations concerning
synthesis and use of variola virus DNA fragments should be revised urgently.
The impact of synthetic biology goes beyond smallpox and could (some members felt “should”) be considered
in relation to the eradication or elimination of other infectious diseases. Several members argued that, if there
was a refusal to destroy the variola virus, there would be no destruction of any dangerous pathogen in the
future. There was a call for a common policy for all diseases slated for eradication.
A comment was made that the history of epidemics shows that they are usually shaped by human activity
such as trade, travel, colonization, population movements etc. Synthetic biology is a new human activity and
may result in its own spate of epidemics.
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Annexes
Annex 1. List of participants
ADVISERS
Dr Marc Sprenger (Chair)
Principal Advisor Dutch Government
Ministry of Interior and Kingdom Relations
Saltsjobaden, Stockholm
SWEDEN
Dr Maryam Abousaber
Expert On Biologicals
Food and Drug Organization
Ministry of Health and Education
Tehran
ISLAMIC REPUBLIC OF IRAN
Dr Clarissa Damaso
Head, Virus Laboratory Biophysics Institute
Federal University of Rio de Janeiro
Rio de Janeiro
BRAZIL
Prof. Lawrence O. Gostin
University Professor
Founding O'Neill Chair in Global Health Law
Georgetown Law
Washington, DC
UNITED STATES OF AMERICA
Prof. Mohammed Hassar
Clinical Pharmacologist and Director Emeritus
Institut Pasteur du Maroc
Rabat
MOROCCO
Prof. Didier Houssin
Président du Haut Conseil de l’évalutation de la
recherché et de l’enseignement
supérieur (HCERES)
Président du Conseil d’administration de l’Agence
Nationale de sécurité sanitaire
de l’alimentation, de
l’environnement et du travail (ANSES)
Paris
FRANCE
Prof. Jean-Jacques Muyembe-Tamfum
Director
Institut National de Recherche Bio-Médicale (INRB)
Kinshasa
DEMOCRATIC REPUBLIC OF THE CONGO
Prof. Li Ruan
Professor
Biotech Center for Viral Disease Emergency
National Institute for Viral Disease Control and
Prevention
Chinese Center for Disease Control and Prevention
Beijing
CHINA
Dr Amadou Alpha Sall
Institut Pasteur de Dakar
Dakar
SENEGAL
Dr Lars Schaade
Vice President
Head of the Centre for Biological Threats and Special
Pathogens
Robert Koch Institute
Berlin
GERMANY
RESOURCE PERSONS
Prof. Mark Buller
Molecular Microbiology & Immunology
Saint Louis University School of Medicine
St. Louis
UNITED STATES OF AMERICA
Dr Inger K. Damon
Director
Division of High Consequence Pathogens and
Pathology
United States Centers for Disease Control and
Prevention
Atlanta
UNITED STATES OF AMERICA
Dr Rinat Maksiutov
Head
Diagnostics Laboratory on Smallpox Virus
State Research Center of Virology (SRC VB VECTOR)
Koltsovo, Novosibirsk
RUSSIAN FEDERATION
Prof. Geoffrey L. Smith
Wellcome Trust Principal Research Fellow
Head, Department of Pathology
University of Cambridge
Cambridge
UNITED KINGDOM
WHO STAFF
Dr Keiji Fukuda,
ADG/HSE
Dr Sylvie Briand,
Director, PED
Mr Alejandro Costa,
Scientist, PED/CED
Ms Ramesh Shademani,
Senior Project Lead, PED
Ms Anaïs Legand,
Technical Officer, PED
Mr David Bramley,
Rapporteur, PED/CED
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Annex 2. Agenda
Consultation on the Public Health Implications
of Synthetic Biology Technology Related to Smallpox
2930 June 2015, World Health Organization, Geneva
Day 1, 29 June 2015
9:00
9:30
-
-
-
-
Introduction of members
Context and purpose of the consultation
Nomination of the Chair
Approval of the agenda
Dr K. Fukuda, WHO
9:30
9:35
9:35
10:45
Declaration of Interests
Ms R. Shademani, WHO
Session 1: Current situation
- Overview of key concerns and issues including
Dr S. Briand, WHO
current approaches to preparedness and control
(10 min)
Prof G. Smith, Chair of SWG
- Summary of the Scientific Working Group (SWG)
report (10 min)
- Discussion
Coffee break
Session 2
- Scenario-based discussion of implications of
synthetic biology
Lunch
Session 2 - continued
- Continued discussion
Coffee break
-
Continued discussion related to research
10:45
11:15
11:15
12:30
12:30
13:30
13:30
15:00
15:00
15:30
15:30 - 17:00
Day 2, 30 June 2015
9:00
10:30
10:30
10:45
10:45
12:25
12:25
12:30
Session 3: Drafting of report
Coffee break
Continued drafting of report
Wrap up
IAG
Dr K. Fukuda, WHO
IAG
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Annex 3. Report of the Scientific Working Group Meeting on Synthetic Biology and
Variola Virus and Smallpox
Scientific Working Group Meeting
on Synthetic Biology and Variola Virus and Smallpox
1617 April 2015
Geneva, Switzerland
Report to inform the Consultation
on the Implications of Synthetic Biology Technology on Variola Virus and Smallpox
Control and Preparedness
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Executive summary
A two-day Scientific Workgroup (SWG) meeting was called by the World Health Organization
(WHO) to provide the scientific background information on synthetic biology technology on the
variola virus, the causative agent of smallpox. The report from this meeting is to inform the meeting
of an Independent Advisory Group on the Implications of Synthetic Biology Technology on Variola
Virus and Smallpox Control and Preparedness. The meeting of the IAG will take place at WHO
Headquarters, 2930 June 2015.
As part of the background discussion, it was noted that smallpox was declared eradicated at the
World Health Assembly in 1980 as a result of a global vaccination campaign in the 1960s and
1970s. Prior to eradication, smallpox was a highly contagious cause of illness and death and is
estimated to have caused 300500 million deaths during the 20
th
century.
At present, there are only two known and sanctioned collections of variola viruses present in two
WHO collaborating centers (Centers for Disease Control and Prevention, USA, and State Research
Centre of Virology and Biotechnology (Vector), Russian Federation). These repositories are for the
purpose of research on diagnosis, treatment, and vaccine development.
The topics discussed during the meeting included:
1) an update on the pace of synthetic biology technology;
2) description of how variola virus could be synthesized and the availability of facilities,
materials, and know-how required;
3) the implications of these technologies, including the potential for misuse;
4) modifications needed for current WHO recommendations on variola virus DNA; and
5) implications for the two WHO collaborating centres storing the stocks of variola virus.
The SWG concluded that with the increasing availability of DNA fragments that can be synthesized
from simple chemicals, it would be possible to recreate the variola virus, and that it could be done
by a skilled laboratory technician or undergraduate students working with viruses in a relatively
simple laboratory. Because of the complexity of variola virus, it was felt that synthesis would
require a deliberate act and sustained effort so was unlikely to be developed by accident. The SWG
noted that although a recreated variola virus could be useful for research on vaccines and
diagnostic tests, there are serious concerns regarding modifications of the virus that could be
accomplished by institutions or individuals with malicious intent. The SWG concluded that the
W(O Recommendations Concerning the Distribution, (andling and Synthesis of Variola Virus
DNA should be revised. )n addition, consideration should be given to adding a component or
separate document on guidance to commercial DNA providers for screening requests for DNA
fragments. Finally, as a result of being able to recreate variola virus using synthetic biology
techniques, the destruction of the remaining stocks of variola virus at the two WHO collaborating
centres would no longer be an irrevocable act. After destruction of the stocks, the variola virus
could be recreated.
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Introduction
At the World Health Assembly in May 2014, WHO was requested to undertake a consultation on the
implications of synthetic biology on smallpox preparedness and control. A consultation process has
begun with convening of a Scientific Working Group (SWG) on 1617 April to deliver a scientific
report on the state of the art of synthetic biology as applied to variola virus. It is composed of
experts in poxviruses, biotechnology, and genetic engineering who were selected on the basis of
their scientific expertise. Representatives from each of the two WHO repositories and a participant
from a company commercially producing viruses participated as resource persons. The list of
participants and declaration of interest are included at
Annex I
and
Annex II,
respectively.
WHO will then convene a meeting of an Independent Advisory Group (IAG) on the Implications of
Synthetic Biology Technology on Variola Virus and Smallpox Control and Preparedness. This report
summarizes the discussions of the SWG and is prepared to inform the IAG, who will meet on 2930
June. The IAG will then draft recommendations to the WHO Director-General.
The specific objectives of the SWG meeting were as follows:
Provide an overview of how variola virus might be re-synthesized and what facilities and
materials would be needed to accomplish this(Part 1);
Assess the availability of the technologies and capability to synthesize the variola virus
(Part 2);
Identify the implications of the technologies, both positive and negative, including the
application and impact of synthetic biology on:
o
the development of new potential vaccines, diagnostic techniques and antiviral
agents, and
o
the intentional misuse of variola virus (Part 3);
Discuss the current W(O recommendations concerning the distribution, handling and
synthesis of variola virus DNA Part 4 ;
Consider the impact of the ability to re-synthesize variola virus on the retention of live
variola virus stocks at the two WHO collaborating centres (Part 5).
Background
This background section has been added by the WHO Secretariat in order to provide a quick
overview on the disease and its causative virus for non-specialized audience.
When smallpox
was still affecting humans, 9 % of cases were due to variola major ordinary
smallpox) with a historical high case fatality ratio sometimes reaching 30%. Smallpox was a
systemic viral disease, generally presenting with a characteristic skin eruption. Smallpox was
transmitted via respiratory droplets through prolonged face-to-face contact within 1.8 metres or by
direct contact with infected body fluids (saliva) or fomites (contaminated objects, e.g. bedding,
clothing, surfaces, etc.).
The strategy to control a smallpox outbreak included early isolation of cases (easily recognizable),
contact tracing and early vaccination of contacts. The spread of smallpox was relatively slow and
secondary cases mostly occurred within households and health care settings.
Since 26 October 1977, no cases were naturally observed. After the eradication of the disease, there
have been only two known and sanctioned stocks of variola virus remaining in the world for the
purpose of research on diagnosis, treatment and vaccine development. The known repositories of
variola virus are located at two WHO collaborating centres (the Centers for Disease Control and
Prevention (CDC) in Atlanta, Georgia, USA, and the State Research Centre of Virology and
Biotechnology (Vector), Koltsovo, Novosibirsk Region, Russian Federation). Although highly
unlikely, re-emergence of smallpox could be due to:
The last natural case of smallpox occurred in Somalia in 1977. The disease was declared eradicated
at the World Health Assembly of 1980. Eradication was the result of an extended immunization
programme tracking down the last case of the disease.
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Persistence in the environment;
Mutation of another orthopoxvirus;
Laboratory release from the WHO repository laboratories;
Re-creation of the virus with synthetic biology technologies.
Overview on synthetic biology technologies and variola virus
Variola virus is a large, complex double-stranded DNA virus and member of the larger group of
poxviruses, called Orthopoxvirus. An important feature of the variola virus and all poxviruses is
that the genome of the virus is non-infectious in isolation. To render this genetic material
infectious, it must be introduced into a living cell that is infected with another poxvirus.
Laboratory studies on reactivating poxviruses date back to the 1930s.
1
Studies focused on the use
of helper poxviruses to reactivate inactivated viruses
so-called non-genetic reactivation.
2
Later
studies focused on stitching together fragments of virus genomes
to produce large recombinant
viruses.
3
Other developments involved inserting entire poxvirus DNA genomes into bacteria to
allow for easier genetic engineering.
4
All of these developments advanced the study of the vaccinia
virus and cowpox virus, poxviruses with similarities to variola. Progress in the chemical synthesis
of DNA has led scientists to replace natural DNA segments or even whole genomes by chemically
synthesized ones.
Recognizing the potential for reconstructing the variola virus using non-genetic reactivation and
newer technologies, WHO has long placed restrictions on the amount of variola virus DNA that may
be possessed by any laboratory other than the two collaborating centres. These limits have been set
at less than 20% of the genome. Careful security controls have also limited access to the large DNA
fragments and virus DNA stored at the collaborating centres.
Synthetic biology is the application of science, technology, and engineering to facilitate and
accelerate the design, manufacture and/or modification of genetic materials in living organisms.
5
The dramatic advances and increasing commercial availability of synthetic DNA have resulted in an
entirely
new paradigm for manufacturing genetic material including making viruses de novo .
Key to this explosive development is use of an engineering–based approach, building on techniques
of modern biotechnology and bioinformatics.
6
There are several aspects of variola/smallpox regarding the impact of synthetic biology that
warrant special attention. These include the fact that smallpox was officially eradicated, but variola
virus is retained, and that vaccination against smallpox was discontinued in most countries by the
97 s. Thus a large proportion of the world’s population has no immunity to the virus, and there is
limited availability of medical countermeasures (i.e. diagnostic test kits, vaccines, and antiviral
medications). Furthermore, the World Health Assembly has passed resolutions to destroy the two
stocks of virus centralized in the WHO collaborating centres. Finally, advances in genetic
engineering have enabled other poxviruses to be recreated, suggesting that variola virus too can be
recreated.
Berry GP, Dedrick HM. A method for changing the virus of rabbit fibroma (Shope) into that of infectious
myxomatosis (Sanarelli). J Bacteriol. 1936;31:501.
2
Fenner F et al. Reactivation of heat-inactivated poxviruses: a general phenomenon which includes the fibroma-
myxoma virus transformation of Berry and Dedrick. Nature. 1959;183:13401.
3
Yao X-D, Evans DH. High frequency genetic recombination and reactivation of Orthopox viruses from DNA
fragments transfected into Leporipoxvirus-infected cells. J Virol. 2003;77:28190.
4
Domi A, Moss B. Cloning the vaccinia virus genome as a bacterial artificial chromosome in Escherichia coli and
recovery of infectious virus in mammalian cells. PNAS. 2002;99:1241520.
5
SCENIHR (Scientific Committee on Emerging and Newly Identified Health Risks), SCCS (Scientific Committee on
Consumer Safety), SCHER (Scientific Committee on Health and Environmental Risks), Synthetic Biology I Definition,
Opinion, 25 September 2014.
6
Carlson R. The changing economics of DNA synthesis. Nature Biotechnology. 2009;27:10924.
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Part 1. How can variola virus be recreated using synthetic biology?
This process essentially involves three steps: synthesis, assembly, and reactivation (Figure 1). The
genomes of more than 50 variola virus strains have been sequenced and are in the public domain.
Although the sequence of the short, terminal, hairpin loops has not been determined for most
sequenced variola virus genomes, at least one sequence has been determined and is in the public
domain. Using published sequence information, DNA fragments of the virus can be synthesized in
small pieces, then assembled step wise into larger pieces using in vitro assembly methods and
finally assembled into full length genomes. Machines are now readily available to accomplish some
of the steps of the assembly stage. DNA fragments used as the starting material can be ordered on
the internet or synthesized locally. Of note, this gene synthesis technology can bypass any
regulations about not making variola virus. For reactivation, large DNA fragments or entirely
assembled genomes are introduced into a cell. A helper poxvirus must also be introduced in some
cases to assist with the final assembly of the DNA pieces and in all cases to enable the reactivation
of the full length DNA into live virus. For the reactivation step, helper poxviruses are easily
available (e.g. fowlpox virus or myxoma virus).
Figure 1. Technical process and feasibility of de novo synthesis of variola virus
Part 2. How easy would it be to recreate the variola virus? What physical facilities, resources,
and know-how are needed?
Although it is possible to recreate variola virus, it is considerably more difficult than recreating
other viruses, such as polio virus, influenza virus, or adenovirus. The recreation of variola virus
would require a deliberate act and sustained effort. It is highly unlikely that this could occur by
accident, and the WHO recommendations concerning the distribution, handling and synthesis of
variola virus DNA (Annex III) are designed specifically to prevent any such event. The recreation of
variola virus is strictly prohibited.
In comparison to other viruses, the greater difficulty in recreating variola virus is due to:
The larger genome size (186 kb versus 7.5 kb for polio virus or 36 kb for adenovirus 5)
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The ends of the double stranded DNA genome are linked by so-called terminal hairpins or
telomeres into one continuous polynucleotide chain. This structure makes the re-creation of
the virus significantly more complicated
The fact that poxvirus DNA in isolation is non-infectious
The need for a helper virus to infect the same cell in which the poxvirus genome is present.
Fragments of variola virus genome are available. Machines for DNA assembly are available and
becoming cheaper.
More of resources and know-how needed include:
Viable cells in which variola virus can grow
Appropriate sterile growth medium, serum, antibiotic and other additives
Knowledge of how to grow tissue culture cells using aseptic techniques to maintain these
cells in a sterile environment
Knowledge of transfection, the ability to introduce large DNA fragments into living cells
Knowledge of how to grow and titrate the helper virus
Knowledge of how to grow stocks of variola virus that are separate from the helper virus.
The minimum type of facility needed would include an incubator for the growth of tissue culture
cells in which variola virus can replicate as well as, ideally, a microbiological safety cabinet in which
cells could be handled (Level 2). All of this information is in the public domain. A skilled laboratory
technician or undergraduate student with experience of working with viruses would be able to
perform the above. The time required would be as little as three months. The cost of DNA fragments
is decreasing rapidly, so the total cost similarly can be expected to decline.
Part 3. How does synthetic biology present increased dangers and challenges regarding
variola virus? Are there some potential benefits of synthetic biology with regard to variola
virus?
A number of serious modifications to the natural virus could be accomplished. These might involve:
Inserting amino acid changes into viral proteins leading to resistance to antiviral treatment
Making nucleotide changes such that current diagnostic kits would not detect the presence
of the virus DNA, or distinguish it from other orthpoxviruses
Changing the surface antigens of variola virus so that they would not be recognized as
efficiently by immune cells or antibodies induced by the current vaccine, rendering the
vaccination less effective
Including additional genes that would enhance the virulence of the virus.
Benefits from the use of synthetic biology to recreate variola virus might include:
Acceleration of the development of new vaccines
Promotion of the study of the function of individual variola virus genes
Facilitation of the production of materials needed for diagnostics.
The scale-up of synthetic biology and its increasingly widespread use introduces a large
constituency that will need to be informed about the risks of working with variola virus and viral
DNA fragments. Screening programmes of providers of DNA fragments and of consumers of DNA
fragments will need to be developed and strengthened.
Part 4. “hortfalls of the urre t WHO re o
e datio s o er i g the distri utio ,
ha dli g a d sy thesis of variola virus DNA i light of the develop e ts i sy theti
biology?
The World Health Assembly passed resolutions (WHA52.10;
WHA 55.15)
that authorize temporary
retention of the existing stocks of variola virus for the purpose of further essential research. As
mentioned previously, the stocks are held in two known and sanctioned locations: CDC in the
United States of America and Vector in the Russian Federation. The programme of research is
overseen by the WHO Advisory Committee on Variola Virus Research, composed of members from
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all WHO regions and advised by experts in public health, fundamental applied research and
regulatory agencies.
Given the research activities, it was deemed necessary to regulate the undertakings through a
policy and hence the development of W(O Recommendations concerning the distribution,
handling
and synthesis of variola virus DNA.
Annex III)
These were written with the scientific
community, particularly orthopoxvirus researchers as the target audience. The recommendations
were designed to restrict and control access to variola DNA to diminish the risk of any person or
group creating variola or a variola-like virus, either intentionally or inadvertently.
According to these recommendations, the two laboratories that house these repositories may
distribute variola virus DNA fragments (not exceeding 20% of the total viral genome) to requesting
scientists, provided the recipients of the material adhere to the WHO recommendations. The two
laboratories that house repositories are required to provide WHO with annual written and verbal
reports regarding the use of live variola virus and the status of the repositories. The fundamental
purpose of these recommendations was to ensure safety measures were respected to avoid any
problems.
Today, the dramatic developments in synthetic biology necessitate a review and revision of the
current WHO recommendations to ensure they are fit to serve their fundamental purpose. The SWG
reviewed the current WHO recommendations. They argue that the purpose of these
recommendations are to prevent the reconstruction of variola virus either through the reactivation
of virus DNA or the accidental incorporation of variola DNA sequences into other orthopoxviruses.
This purpose, the SWG proposes, should be made explicit in the recommendations document. The
SWG suggests that there are several ways to prevent the reconstruction of variola virus. One is to
limit the amount of variola virus DNA held by any one laboratory to an amount far less than a
complete genome. The other way is to institute operations and practices that preclude any
possibility of variola DNA coming in contact with another replication competent orthopoxvirus. As
the capacity to synthesize the genes has improved to the point where genes and whole genomes can
be synthesized, it is important to remember that clones encoding variola virus proteins should also
be handled with the same restrictions in mind.
In the current climate of synthetic biology, it is recognized that the constituency for guidance is
much broader. It includes national Ministries of Health, safety offices and legislative bodies,
professional societies of scientists, specifically laboratory technicians and public health authorities,
but also the institutions formal and informal that represent those involved in synthetic biology,
including an unknown and presumably broad array of persons and institutions, commercial
enterprises and individuals. A draft revision of these Recommendations is in Annex I at the end of
this document.
In addition, it is worth considering adding a section to these recommendations or creating a
separate document on screening guidance for providers of synthetic DNA. This would enable
providers of DNA to screen orders and to address biosecurity concerns associated with the
potential misuse of their products. It is recognized that such guidance cannot ensure that variola
virus will not be synthesized by those unaware of, or choosing to ignore, such guidance.
Part 5. How does the ability to more easily recreate the variola virus impact on the retention
of live variola virus stocks at the two WHO collaborating centres?
The immediate impact of being able to recreate variola virus using synthetic biology
techniques is that the destruction of the remaining stocks of variola virus at the two WHO
collaborating centres would no longer be an irrevocable act. After destruction of the stocks,
the variola virus could be recreated.
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Conclusion
With the rapid advances in synthetic biology, there is now the capability to recreate the
variola virus, the causative agent of smallpox. While recreating variola is quite complex, the
availability of genetic material, machines to do complex assembly, and increasing know-
how among a broad array of persons, recreation may increasingly be possible.
Furthermore, the rapid rise in availability of genetic material from commercial sources and
the so-called grey market is driving the cost of this material down, making recreation
possible by multiple institutions and persons, including those with malicious intent. The
W(O Recommendations
concerning the distribution, handling and synthesis of variola
virus DNA, should be revised. Consideration should be given to adding a component or
separate document on guidance to commercial DNA providers for screening requests for
DNA fragments.
With the development of these technologies, public health agencies have to be aware that
henceforth there will always be the potential to recreate variola virus and therefore the
risk of smallpox happening again can never be eradicated.
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Annex I
List of participants
Members of Scientific Working Group
Dr Antonio Alcami
Researchy Professor
Centro de Biologia Molecular Severo Ochoa Nicolàs Cabrera
Spain
Dr Yagob AL-Mazrou*
Secretary General
Saudi Health Council
Saudi Arabia
Dr Robert Drillien
Recherche Scientist
Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC)
France
Dr David Evans
Professor and Vice-Dean, Research
Faculty of Medicine & Dentistry
2J2.04 W C Mackenzie Health Sciences Centre
University of Alberta
Canada
Dr Grant McFadden
Department of Molecular Genetics & Microbiology
College of Medicine
University of Florida
United States of America
Dr Devendra. T. Mourya*
Director
National Institute of Virology
India
Professor Jean-Jacques Muyembe-Tamfum
Director
Institut National de Recherche Bio-Médicale (INRB)
Democratic Republic of the Congo
Dr Masayuki Saijo
Director
Department of Virology, National Institute of Infectious Diseases
Japan
Professor Geoffrey L. Smith
Wellcome Trust Principal Research Fellow
Head, Department of Pathology
University of Cambridge
United Kingdom
Professor Gerd Sutter*
Director, Department of Veterinary Sciences
Professor and Chair for Virology
Institute for Infectious Diseases and Zoonoses
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University of Munich LMU
Germany
*-unable to attend in person
Resource Persons:
Dr Robert Carlson
Principal Investigator, Biodesic
United States of America
Dr Inger K. Damon
Director
Division of High Consequence Pathogens and Pathology
Centers for Disease Control and Prevention
United States of America
Dr Rinat Maksiutov
Head
Diagnostics Laboratory on Smallpox Virus
State Research Center of Virology
Russian Federation
Dr Victoria Olson
Microbiologist
Lead, Virus-Host Molecular Interactions Team
Poxvirus and Rabies Branch
Division of High-Consequence Pathogens and Pathology
National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and
Prevention
United States of America
WHO Secretariat
Dr Keiji Fukuda, Assistant Director General, Health Security Cluster (HSE) E
Dr Sylvie Briand, Director, Pandemic and Epidemic Department (PED)
Ms Ramesh Shademani, Technical Officer, Pandemic and Epidemic Department (PED)
Ms Margaux Mathis, Pandemic and Epidemic Department (PED)
Rapporteur
Dr Bess Miller, Pandemic and Epidemic Department (PED)
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Annex II. Declaration of Interests
The WHO consultation on the implication of synthetic biology on smallpox preparedness and
control will be made through technical consultation with experts, including participants of the
Scientific Working Group.
In accordance with WHO policy, all participants of the Scientific Working Group completed the
WHO form for Declaration of Interests for WHO experts before start of the meeting. At the start of
the consultation, the interests declared by the participants were disclosed to all consultation
participants.
The participants declared the following personal current or recent (past 4 years) financial or other
interests relevant to the subject of work:
David Evans is currently discussing a possible research contract with a private US company
interested in synthesizing a poxvirus. The terms of the contract remain to be finalized. He also sits
on the Federal advisory committee for the Canadian pathogens and toxins Act that will at some
point need to discuss the implications of gene synthesis technology.
)n response to employment and consulting, Robert Drillien has declared employment and
consulting on monkeypox and variola to Bavarian Nordic for an amount of 5000 euros for work
conducted in 2011 and ceased in 2012.
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Annex III. WHO Recommendations concerning the distribution, handling and synthesis of
variola virus DNA
Based upon recommendations made to WHO by the WHO
Ad Hoc
Committee on
Orthopoxvirus Infections (1990 & 1994) and the WHO Advisory Committee on Variola Virus
Research (2003, 2004 & 2007)
7
May 2008
Preamble
The only known stocks of variola virus are held at the Centers for Disease Control and
Prevention (CDC), Atlanta, Georgia, United States of America, and the Russian State Centre on
Virology and Biotechnology (Vector), Koltsovo, Novosibirsk Region, Russian Federation, both of
which are WHO (World Health Organization) collaborating centres. Any research using live variola
virus has to be performed in the maximum containment laboratories of these institutions and
requires permission from WHO. Genetic engineering of variola virus and attempts to produce live
virus from DNA are strictly prohibited.
Scientists wishing to perform research on diagnostics or treatment of smallpox, or vaccines against
smallpox, may obtain parts of the variola virus genome, which in its naked form is not infectious,
from one of the WHO collaborating centres. WHO or the collaborating centres will advise scientists
on the procedure to follow in order to obtain permission to receive viral DNA. Scientists should be
aware that the amount of DNA they request or hold must not exceed 20% of the total viral genome
(see also below).
The scientific community may not be fully aware that the distribution, synthesis and handling of
variola virus DNA is governed by a series of recommendations made by the WHO Ad Hoc
Committee on Orthopoxvirus Infections and by the WHO Advisory Committee on Variola Virus
Research, which have been endorsed by WHO. Scientists wishing to obtain, handle or synthesize
variola virus DNA must therefore comply with these recommendations. The present document
gives an overview of these recommendations, which are reproduced in their original wording as
found in the various WHO meeting reports
(http://www.who.int/csr/disease/smallpox/research/en/index.html).
Distribution of variola virus DNA
The two WHO collaborating centres acting as repositories for variola virus may distribute variola
virus DNA fragments to appropriate research laboratories that request them provided that:
a) The request has been submitted to the international repository through
WHO/Headquarters (1,
2).
b) The receiving laboratory agrees that the DNA will not be distributed to third parties, unless
authorization by WHO has been obtained. This should be controlled through Material
Transfer Agreements between the distributing and receiving laboratories (with copy to
WHO) (1,
2, 3).
c) An annual report on the status of the variola virus DNA will be made to the international
repository and to WHO (2). No laboratory (except the international repositories) shall be
permitted to hold clones representing more than 20% of the variola virus genome at any
one time (2). Fragments of variola virus DNA, not exceeding 500 base pairs in length, may
be freely distributed between identified laboratories for use as positive controls or
standards in diagnostic kits, providing collectively they do not exceed 20% of the total
genome size (4,
5).
7
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Handling of variola virus DNA
Studies on variola virus DNA are permitted on condition that:
a) The DNA will not be used for insertion into vaccinia virus or related poxviruses (2).
b) All work with variola virus DNA (greater than 100 nucleotides long) is done following a
written risk assessment and in accordance with locally agreed national guidelines (2).
c) No other orthopoxviruses are handled in the laboratory rooms where variola virus DNA is
studied (2).
d) All by-products containing variola virus DNA are disposed of by autoclaving at 120°C for 30
minutes (6).
Synthesis of variola virus DNA
a) Attempts to synthesize full-length variola virus genomes or infectious variola viruses from
smaller DNA fragments are strictly forbidden (7).
b) In vitro synthesis of variola virus DNA, or any DNA encoding a variola virus polypeptide,
where the length of the DNA exceeds 500 base pairs requires approval from WHO. Similarly,
mutagenesis of orthopoxvirus DNA of larger than 500 base pairs, with the aim of producing
the corresponding variola virus DNA sequence, again requires permission from WHO. Under
no circumstances can laboratories, other than the WHO collaborating centres hosting the
variola virus repositories, hold DNA comprising more than 20% of the total genome (4,
7).
c) Production of DNA microarrays, on which small oligonucleotides (less than 80 base pairs)
are covalently bound to a matrix and which, in aggregate, may span the entire genome, does
not require permission from WHO (4,
5).
Reporting obligations
Variola virus DNA is distributed to scientists on the understanding that an annual report on the
status of variola virus-specific DNA clones will be made to the international repository (see above:
Distribution of variola virus DNA, paragraph c). This reporting obligation also applies to scientists
who have obtained permission from WHO to synthesize variola virus DNA larger than 500 base
pairs, or generate variola virus-like DNA by site-directed mutagenesis of other orthopoxvirus DNA.
References
1 Report of the
Ad Hoc
Committee on Orthopoxvirus Infections, 1990, page 5.
2 Report of the
Ad Hoc
Committee on Orthopoxvirus Infections, 1994, page 8.
3 Report of the WHO Advisory Committee on Variola virus Research, 2007, 23.4
4 Report of the WHO Advisory Committee on Variola virus Research, 2003, 11.7
5 Report of the WHO Advisory Committee on Variola virus Research, 2004, 8.2.
6 Report of the Ad Hoc Committee on Orthopoxvirus Infections, 1994, page 9.
7 Report of the WHO Advisory Committee on Variola virus Research, 2004, 8.4.
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